Index A | E | F | I | M | N | P | R | S | T | U A amino_acid (mzpaf.ImmoniumIonAnnotation attribute) AnnotationStringParser (class in mzpaf) E end_position (mzpaf.InternalPeptideFragmentIonAnnotation attribute) F FormulaAnnotation (class in mzpaf) from_json() (mzpaf.IonAnnotationBase class method) I ImmoniumIonAnnotation (class in mzpaf) InternalPeptideFragmentIonAnnotation (class in mzpaf) InvalidAnnotation (class in mzpaf) IonAnnotationBase (class in mzpaf) M mass_error (mzpaf.MassError attribute) MassError (class in mzpaf) modification (mzpaf.ImmoniumIonAnnotation attribute) module mzpaf mzpaf module N NamedCompoundIonAnnotation (class in mzpaf) P parse_annotation() (in module mzpaf) (mzpaf.AnnotationStringParser method) PeptideFragmentIonAnnotation (class in mzpaf) position (mzpaf.PeptideFragmentIonAnnotation attribute) PrecursorIonAnnotation (class in mzpaf) R ReferenceIonAnnotation (class in mzpaf) S sequence (mzpaf.InternalPeptideFragmentIonAnnotation attribute) (mzpaf.PeptideFragmentIonAnnotation attribute) serialize() (mzpaf.InvalidAnnotation method) (mzpaf.IonAnnotationBase method) (mzpaf.MassError method) (mzpaf.Unannotated method) series (mzpaf.PeptideFragmentIonAnnotation attribute) SMILESAnnotation (class in mzpaf) start_position (mzpaf.InternalPeptideFragmentIonAnnotation attribute) T to_json() (mzpaf.IonAnnotationBase method) (mzpaf.MassError method) U Unannotated (class in mzpaf) unit (mzpaf.MassError attribute)